Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 83666
Gene Symbol: PARP9
PARP9
0.100 Biomarker disease BEFREE Its BAL concentrations were higher in IPF patients than in controls and correlated with disease severity. 31678459 2020
Entrez Id: 10998
Gene Symbol: SLC27A5
SLC27A5
0.100 Biomarker disease BEFREE Its BAL concentrations were higher in IPF patients than in controls and correlated with disease severity. 31678459 2020
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.100 Biomarker disease BEFREE Bleomycin and TGF-β1 were respectively used to induce the IPF mice model and human lung fibroblasts to myofibroblast differentiation. 31786325 2020
Entrez Id: 1056
Gene Symbol: CEL
CEL
0.100 Biomarker disease BEFREE Its BAL concentrations were higher in IPF patients than in controls and correlated with disease severity. 31678459 2020
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 Biomarker disease BEFREE An in-vitro assay revealed that SIgA bound to the surface of A549 cells and significantly promoted production of vascular endothelial growth factor (VEGF), transforming growth factor (TGF)-β and interleukin (IL)-8, important cytokines in the pathogenesis of IPF. 31660581 2020
Entrez Id: 1490
Gene Symbol: CCN2
CCN2
0.100 Biomarker disease BEFREE This study was designed to assess the safety, tolerability, and efficacy of pamrevlumab (FG-3019), a fully recombinant human monoclonal antibody against CTGF, in idiopathic pulmonary fibrosis. 31575509 2020
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.100 Biomarker disease BEFREE We found the highly aligned IPF collagen structure promoted enhanced cell elongation and f-actin alignment, along with increased cell migration speed and straightness relative to the normal tissues. 31774302 2020
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 Biomarker disease BEFREE Nintedanib, a multitargeted TKI, blocks fibroblast growth factor and platelet-derived growth factor receptor as well as VEGF receptor, and is indicated for the treatment of idiopathic pulmonary fibrosis. 31699213 2020
Entrez Id: 3146
Gene Symbol: HMGB1
HMGB1
0.030 AlteredExpression disease BEFREE Higher levels of HMGB1 were associated with earlier onset of AE in stable IPF patients and with shorter survival in AE-IPF patients (P = 0.030 and 0.001, respectively). 31270920 2020
Entrez Id: 3491
Gene Symbol: CCN1
CCN1
0.030 Biomarker disease BEFREE Given the plausible role of CCN1 in cellular senescence and pathobiology of IPF, the predictive value of CCN1 in disease progression among patients with IPF warrants further investigation. 31765873 2020
Entrez Id: 9242
Gene Symbol: MSC
MSC
0.030 AlteredExpression disease BEFREE In summary, this study linking the Shh-Wnt signaling cascade with LR-MSC fibrogenic activity furthered the current understanding of pulmonary fibrosis pathogenesis and might provide a new perspective in the development of treatment strategies for IPF. 31541181 2020
Entrez Id: 23049
Gene Symbol: SMG1
SMG1
0.020 Biomarker disease BEFREE Notably, an ATX inhibitor is currently being investigated in 2 large phase 3 studies in idiopathic pulmonary fibrosis, underscoring the clinical relevance of our findings. 31550726 2020
Entrez Id: 5168
Gene Symbol: ENPP2
ENPP2
0.020 Biomarker disease BEFREE Notably, an ATX inhibitor is currently being investigated in 2 large phase 3 studies in idiopathic pulmonary fibrosis, underscoring the clinical relevance of our findings. 31550726 2020
Entrez Id: 3309
Gene Symbol: HSPA5
HSPA5
0.020 Biomarker disease BEFREE GRP78 is reduced in AT2 cells from aged mice and IPF patients, and ER stress inhibitor tauroursodeoxycholic acid ameliorates ER stress and fibrosis in Grp78 KO mouse and IPF lung slice cultures. 31738079 2020
Entrez Id: 6868
Gene Symbol: ADAM17
ADAM17
0.020 Biomarker disease BEFREE Moreover, ADAM17 in IPF patients with acute exacerbation (AE-IPF) was significantly higher than that in stable IPF (S-IPF) patients. 31469350 2020
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.020 AlteredExpression disease BEFREE Bleomycin (BLM) was used to induce the IPF model in Sprague-Dawley rats to detect the expression of miR-455-3p, Bax, and B-cell lymphoma factor 2 (Bcl-2). 31407409 2020
Entrez Id: 5599
Gene Symbol: MAPK8
MAPK8
0.010 Biomarker disease BEFREE Using IPF mouse models, lung fibroblasts for the experiments were treated with miR-448 mimic, miR-448 inhibitor, si-ABCC3, or SP600125 (inhibitor of JNK) to evaluate the cell proliferation and apoptosis in response to miR-448. 31506947 2020
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 Biomarker disease BEFREE Functionally, this effect reduced murine lung exposure to nintedanib, an FDA-approved IPF therapy known to be a P-gp substrate. 31419911 2020
Entrez Id: 64798
Gene Symbol: DEPTOR
DEPTOR
0.010 AlteredExpression disease BEFREE The observation that decreased DEPTOR expression associates with increased susceptibility to IPF, supports recent studies demonstrating the importance of mTOR signalling in lung fibrosis. 31710517 2020
Entrez Id: 1514
Gene Symbol: CTSL
CTSL
0.010 Biomarker disease BEFREE A novel cathepsin L inhibitor prevents the progression of idiopathic pulmonary fibrosis. 31744600 2020
Entrez Id: 3199
Gene Symbol: HOXA2
HOXA2
0.010 PosttranslationalModification disease BEFREE The correlation between low-methylation subgroup and IPF was further validated by quantitative methylation analysis of marker genes commonly hypermethylated in SCC (HOXA2, HOXA9 and PCDHGB6), and markers specifically hypermethylated in high-methylation subgroup (DLEC1, CFTR, MT1M, CRIP3 and ALDH7A1) in 77 SCC cases using pyrosequencing (p = 0.003). 31241180 2020
Entrez Id: 55010
Gene Symbol: PARPBP
PARPBP
0.010 Biomarker disease BEFREE A Randomized, Double-Blinded, Placebo-Controlled, Dose-Escalation Phase 1 Study of Aerosolized Pirfenidone Delivered via the PARI Investigational eFlow Nebulizer in Volunteers and Patients with Idiopathic Pulmonary Fibrosis. 30698487 2020
Entrez Id: 554212
Gene Symbol: MIR448
MIR448
0.010 AlteredExpression disease BEFREE Additionally, miR-448 was found to be highly expressed in IPF lung tissues with low expression levels of ABCC3. 31506947 2020
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.010 AlteredExpression disease BEFREE We report that P-gp and BCRP expression in IPF patient lungs was comparable to controls. 31419911 2020
Entrez Id: 3778
Gene Symbol: KCNMA1
KCNMA1
0.010 AlteredExpression disease BEFREE Patch clamp experiments demonstrated that IPF fibroblasts exhibit increased BK channel activity. 31486669 2020